Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.73□□□□□ -0.05
SgcbP82349 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Mir770-201ENSMUST00000103252 94 ntBASIC14.73□□□□□ -0.05
SgcbP82349 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.73□□□□□ -0.05
SgcbP82349 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SgcbP82349 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Gm14859-201ENSMUST00000117752 357 ntBASIC14.72□□□□□ -0.05
SgcbP82349 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SgcbP82349 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.72□□□□□ -0.05
SgcbP82349 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SgcbP82349 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SgcbP82349 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.72□□□□□ -0.05
SgcbP82349 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.72□□□□□ -0.05
SgcbP82349 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SgcbP82349 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SgcbP82349 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SgcbP82349 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.71□□□□□ -0.05
SgcbP82349 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.71□□□□□ -0.05
SgcbP82349 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.71□□□□□ -0.05
SgcbP82349 Gm17808-201ENSMUST00000200859 894 ntBASIC14.71□□□□□ -0.05
SgcbP82349 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SgcbP82349 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SgcbP82349 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.71□□□□□ -0.05
SgcbP82349 Gm7367-201ENSMUST00000057611 492 ntBASIC14.71□□□□□ -0.05
SgcbP82349 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SgcbP82349 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SgcbP82349 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.71□□□□□ -0.06
SgcbP82349 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SgcbP82349 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SgcbP82349 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SgcbP82349 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SgcbP82349 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.7□□□□□ -0.06
SgcbP82349 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.7□□□□□ -0.06
SgcbP82349 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SgcbP82349 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SgcbP82349 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms