Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pdlim4P70271 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.72□□□□□ -0.21
Pdlim4P70271 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.72□□□□□ -0.21
Pdlim4P70271 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pdlim4P70271 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdlim4P70271 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Pdlim4P70271 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim4P70271 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim4P70271 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.71□□□□□ -0.21
Pdlim4P70271 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim4P70271 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim4P70271 Gm18032-201ENSMUST00000222541 538 ntBASIC13.71□□□□□ -0.21
Pdlim4P70271 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim4P70271 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim4P70271 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim4P70271 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pdlim4P70271 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim4P70271 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Pdlim4P70271 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim4P70271 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim4P70271 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pdlim4P70271 Actl10-202ENSMUST00000226583 1501 ntBASIC13.7□□□□□ -0.22
Pdlim4P70271 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim4P70271 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdlim4P70271 Gm26039-201ENSMUST00000158152 144 ntBASIC13.7□□□□□ -0.22
Pdlim4P70271 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim4P70271 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms