Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Six5P70178 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Six5P70178 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.46■□□□□ 0.06
Six5P70178 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six5P70178 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six5P70178 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six5P70178 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six5P70178 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.46■□□□□ 0.06
Six5P70178 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Six5P70178 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Six5P70178 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.45■□□□□ 0.06
Six5P70178 Gm11355-201ENSMUST00000121120 306 ntBASIC15.45■□□□□ 0.06
Six5P70178 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.45■□□□□ 0.06
Six5P70178 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.45■□□□□ 0.06
Six5P70178 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Six5P70178 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.45■□□□□ 0.06
Six5P70178 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.45■□□□□ 0.06
Six5P70178 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six5P70178 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.44■□□□□ 0.06
Six5P70178 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.44■□□□□ 0.06
Six5P70178 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Gm13836-201ENSMUST00000121159 501 ntBASIC15.44■□□□□ 0.06
Six5P70178 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Six5P70178 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Six5P70178 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Six5P70178 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Six5P70178 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six5P70178 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Six5P70178 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.44■□□□□ 0.06
Six5P70178 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Six5P70178 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.43■□□□□ 0.06
Six5P70178 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Six5P70178 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Six5P70178 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.43■□□□□ 0.06
Six5P70178 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.42■□□□□ 0.06
Six5P70178 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Six5P70178 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Six5P70178 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Gm37722-201ENSMUST00000193757 208 ntBASIC15.42■□□□□ 0.06
Six5P70178 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.42■□□□□ 0.06
Six5P70178 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Six5P70178 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Six5P70178 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.42■□□□□ 0.06
Six5P70178 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Haglr-201ENSMUST00000100000 2085 ntBASIC15.42■□□□□ 0.06
Six5P70178 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Six5P70178 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms