Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lhx1P63006 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.19■□□□□ 0.18
Lhx1P63006 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.19■□□□□ 0.18
Lhx1P63006 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Gm28033-201ENSMUST00000184224 96 ntBASIC16.19■□□□□ 0.18
Lhx1P63006 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lhx1P63006 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.19■□□□□ 0.18
Lhx1P63006 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx1P63006 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
Lhx1P63006 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lhx1P63006 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.18■□□□□ 0.18
Lhx1P63006 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx1P63006 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx1P63006 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.18■□□□□ 0.18
Lhx1P63006 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Lhx1P63006 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lhx1P63006 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx1P63006 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Gm13312-201ENSMUST00000119631 718 ntBASIC16.17■□□□□ 0.18
Lhx1P63006 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.17■□□□□ 0.18
Lhx1P63006 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lhx1P63006 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Lhx1P63006 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx1P63006 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx1P63006 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx1P63006 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lhx1P63006 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx1P63006 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lhx1P63006 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Rprl3-201ENSMUST00000157400 290 ntBASIC16.16■□□□□ 0.18
Lhx1P63006 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx1P63006 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx1P63006 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lhx1P63006 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms