Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Rpl39P62892 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpl39P62892 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.82□□□□□ -0.52
Rpl39P62892 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl39P62892 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl39P62892 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpl39P62892 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.81□□□□□ -0.52
Rpl39P62892 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39P62892 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.81□□□□□ -0.52
Rpl39P62892 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpl39P62892 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39P62892 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rpl39P62892 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl39P62892 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.8□□□□□ -0.52
Rpl39P62892 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.8□□□□□ -0.52
Rpl39P62892 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpl39P62892 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.8□□□□□ -0.52
Rpl39P62892 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Rpl39P62892 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.8□□□□□ -0.52
Rpl39P62892 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpl39P62892 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.8□□□□□ -0.52
Rpl39P62892 Gm5874-201ENSMUST00000096101 508 ntBASIC11.8□□□□□ -0.52
Rpl39P62892 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpl39P62892 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.8□□□□□ -0.52
Rpl39P62892 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rpl39P62892 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rpl39P62892 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpl39P62892 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rpl39P62892 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.8□□□□□ -0.52
Rpl39P62892 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rpl39P62892 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpl39P62892 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm13148-201ENSMUST00000118892 745 ntBASIC11.79□□□□□ -0.52
Rpl39P62892 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms