Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp46P62069 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp46P62069 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp46P62069 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp46P62069 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp46P62069 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp46P62069 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp46P62069 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp46P62069 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.23■□□□□ 0.35
Usp46P62069 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp46P62069 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp46P62069 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp46P62069 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp46P62069 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp46P62069 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp46P62069 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp46P62069 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Usp46P62069 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp46P62069 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp46P62069 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.22■□□□□ 0.35
Usp46P62069 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.22■□□□□ 0.35
Usp46P62069 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp46P62069 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.22■□□□□ 0.35
Usp46P62069 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp46P62069 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp46P62069 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp46P62069 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.21■□□□□ 0.35
Usp46P62069 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.21■□□□□ 0.35
Usp46P62069 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.21■□□□□ 0.35
Usp46P62069 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Usp46P62069 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp46P62069 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp46P62069 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.21■□□□□ 0.34
Usp46P62069 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp46P62069 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp46P62069 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp46P62069 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp46P62069 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp46P62069 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp46P62069 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.2■□□□□ 0.34
Usp46P62069 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp46P62069 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms