Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.56□□□□□ -0.08
Sec61a1P61620 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.56□□□□□ -0.08
Sec61a1P61620 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.56□□□□□ -0.08
Sec61a1P61620 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sec61a1P61620 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sec61a1P61620 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.55□□□□□ -0.08
Sec61a1P61620 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.55□□□□□ -0.08
Sec61a1P61620 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sec61a1P61620 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.55□□□□□ -0.08
Sec61a1P61620 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sec61a1P61620 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.55□□□□□ -0.08
Sec61a1P61620 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.55□□□□□ -0.08
Sec61a1P61620 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a1P61620 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Gm10517-202ENSMUST00000192970 758 ntBASIC14.54□□□□□ -0.08
Sec61a1P61620 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a1P61620 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sec61a1P61620 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Gm21814-202ENSMUST00000203277 873 ntBASIC14.53□□□□□ -0.08
Sec61a1P61620 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.53□□□□□ -0.08
Sec61a1P61620 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.53□□□□□ -0.08
Sec61a1P61620 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Sec61a1P61620 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms