Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.45■□□□□ 0.54
Tpm1P58771 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Gm18025-201ENSMUST00000221733 862 ntBASIC18.45■□□□□ 0.54
Tpm1P58771 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Tpm1P58771 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tpm1P58771 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tpm1P58771 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.44■□□□□ 0.54
Tpm1P58771 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tpm1P58771 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.44■□□□□ 0.54
Tpm1P58771 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Gm12382-201ENSMUST00000122005 922 ntBASIC18.44■□□□□ 0.54
Tpm1P58771 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.44■□□□□ 0.54
Tpm1P58771 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tpm1P58771 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tpm1P58771 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Tpm1P58771 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tpm1P58771 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tpm1P58771 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.43■□□□□ 0.54
Tpm1P58771 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tpm1P58771 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.43■□□□□ 0.54
Tpm1P58771 Gm11249-201ENSMUST00000117071 859 ntBASIC18.43■□□□□ 0.54
Tpm1P58771 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tpm1P58771 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tpm1P58771 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tpm1P58771 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.42■□□□□ 0.54
Tpm1P58771 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.42■□□□□ 0.54
Tpm1P58771 Gm8495-201ENSMUST00000188740 694 ntBASIC18.42■□□□□ 0.54
Tpm1P58771 Gm42545-201ENSMUST00000202755 922 ntBASIC18.42■□□□□ 0.54
Tpm1P58771 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Tpm1P58771 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Tpm1P58771 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tpm1P58771 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm1P58771 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Tpm1P58771 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Tpm1P58771 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Tpm1P58771 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Tpm1P58771 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms