Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.57■□□□□ 0.24
SmoP56726 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
SmoP56726 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.57■□□□□ 0.24
SmoP56726 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.57■□□□□ 0.24
SmoP56726 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SmoP56726 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SmoP56726 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SmoP56726 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SmoP56726 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SmoP56726 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SmoP56726 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.57■□□□□ 0.24
SmoP56726 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SmoP56726 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SmoP56726 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SmoP56726 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SmoP56726 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SmoP56726 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.55■□□□□ 0.24
SmoP56726 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SmoP56726 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SmoP56726 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SmoP56726 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SmoP56726 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SmoP56726 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.55■□□□□ 0.24
SmoP56726 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SmoP56726 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SmoP56726 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.54■□□□□ 0.24
SmoP56726 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.54■□□□□ 0.24
SmoP56726 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Gm17971-201ENSMUST00000190239 806 ntBASIC16.54■□□□□ 0.24
SmoP56726 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.54■□□□□ 0.24
SmoP56726 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.54■□□□□ 0.24
SmoP56726 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SmoP56726 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.54■□□□□ 0.24
SmoP56726 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.53■□□□□ 0.24
SmoP56726 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.53■□□□□ 0.24
SmoP56726 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.53■□□□□ 0.24
SmoP56726 Gm13312-201ENSMUST00000119631 718 ntBASIC16.53■□□□□ 0.24
SmoP56726 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.53■□□□□ 0.24
SmoP56726 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.53■□□□□ 0.24
SmoP56726 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SmoP56726 Gm36967-201ENSMUST00000193814 266 ntBASIC16.53■□□□□ 0.24
SmoP56726 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SmoP56726 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.53■□□□□ 0.24
SmoP56726 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SmoP56726 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms