Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.74■□□□□ 0.27
Ddx6P54823 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx6P54823 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx6P54823 Gm25745-201ENSMUST00000174945 133 ntBASIC16.74■□□□□ 0.27
Ddx6P54823 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.74■□□□□ 0.27
Ddx6P54823 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx6P54823 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx6P54823 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx6P54823 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ddx6P54823 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx6P54823 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44357-201ENSMUST00000195897 142 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm19658-201ENSMUST00000196231 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44367-201ENSMUST00000196836 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44350-201ENSMUST00000197197 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44390-201ENSMUST00000197533 144 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44313-201ENSMUST00000198018 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44486-201ENSMUST00000198508 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44314-201ENSMUST00000199263 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44394-201ENSMUST00000199558 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44484-201ENSMUST00000199873 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44466-201ENSMUST00000200264 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm44359-201ENSMUST00000200671 138 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx6P54823 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx6P54823 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx6P54823 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx6P54823 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.73■□□□□ 0.27
Ddx6P54823 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.72■□□□□ 0.27
Ddx6P54823 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Gm2651-201ENSMUST00000203560 838 ntBASIC16.72■□□□□ 0.27
Ddx6P54823 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx6P54823 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx6P54823 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ddx6P54823 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx6P54823 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx6P54823 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx6P54823 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx6P54823 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx6P54823 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Ddx6P54823 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx6P54823 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx6P54823 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx6P54823 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx6P54823 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx6P54823 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx6P54823 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.7■□□□□ 0.26
Ddx6P54823 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx6P54823 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms