Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl5P50228 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
Cxcl5P50228 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl5P50228 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Mir8112-201ENSMUST00000184382 131 ntBASIC14.4□□□□□ -0.1
Cxcl5P50228 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl5P50228 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.4□□□□□ -0.1
Cxcl5P50228 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl5P50228 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl5P50228 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.4□□□□□ -0.1
Cxcl5P50228 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cxcl5P50228 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl5P50228 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.4□□□□□ -0.1
Cxcl5P50228 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl5P50228 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Gm12382-201ENSMUST00000122005 922 ntBASIC14.39□□□□□ -0.11
Cxcl5P50228 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.39□□□□□ -0.11
Cxcl5P50228 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl5P50228 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.39□□□□□ -0.11
Cxcl5P50228 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.38□□□□□ -0.11
Cxcl5P50228 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.38□□□□□ -0.11
Cxcl5P50228 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl5P50228 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl5P50228 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cxcl5P50228 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cxcl5P50228 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cxcl5P50228 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.37□□□□□ -0.11
Cxcl5P50228 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl5P50228 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl5P50228 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms