Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.73□□□□□ -0.21
Nkx2-1P50220 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.73□□□□□ -0.21
Nkx2-1P50220 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Gm10138-203ENSMUST00000206952 366 ntBASIC13.72□□□□□ -0.21
Nkx2-1P50220 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-1P50220 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.71□□□□□ -0.21
Nkx2-1P50220 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.71□□□□□ -0.21
Nkx2-1P50220 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-1P50220 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-1P50220 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nkx2-1P50220 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.7□□□□□ -0.22
Nkx2-1P50220 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms