Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
GdnfP48540 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
GdnfP48540 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GdnfP48540 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.48□□□□□ -0.09
GdnfP48540 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GdnfP48540 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GdnfP48540 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.47□□□□□ -0.09
GdnfP48540 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.47□□□□□ -0.09
GdnfP48540 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GdnfP48540 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GdnfP48540 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GdnfP48540 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.47□□□□□ -0.09
GdnfP48540 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GdnfP48540 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.46□□□□□ -0.09
GdnfP48540 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Mir1199-201ENSMUST00000117015 119 ntBASIC14.46□□□□□ -0.09
GdnfP48540 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Gm10517-202ENSMUST00000192970 758 ntBASIC14.46□□□□□ -0.09
GdnfP48540 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.46□□□□□ -0.09
GdnfP48540 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GdnfP48540 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.46□□□□□ -0.09
GdnfP48540 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GdnfP48540 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GdnfP48540 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GdnfP48540 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
GdnfP48540 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GdnfP48540 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GdnfP48540 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.45□□□□□ -0.1
GdnfP48540 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.45□□□□□ -0.1
GdnfP48540 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Gm10812-201ENSMUST00000099864 546 ntBASIC14.45□□□□□ -0.1
GdnfP48540 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GdnfP48540 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.45□□□□□ -0.1
GdnfP48540 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
GdnfP48540 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
GdnfP48540 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GdnfP48540 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.45□□□□□ -0.1
GdnfP48540 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms