Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pbx1P41778 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pbx1P41778 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pbx1P41778 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pbx1P41778 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Gm11539-201ENSMUST00000119837 557 ntBASIC17.8■□□□□ 0.44
Pbx1P41778 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.8■□□□□ 0.44
Pbx1P41778 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pbx1P41778 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.8■□□□□ 0.44
Pbx1P41778 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pbx1P41778 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.79■□□□□ 0.44
Pbx1P41778 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pbx1P41778 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.79■□□□□ 0.44
Pbx1P41778 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pbx1P41778 Gm36967-201ENSMUST00000193814 266 ntBASIC17.79■□□□□ 0.44
Pbx1P41778 Gm7370-201ENSMUST00000219471 767 ntBASIC17.79■□□□□ 0.44
Pbx1P41778 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pbx1P41778 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pbx1P41778 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pbx1P41778 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.78■□□□□ 0.44
Pbx1P41778 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.78■□□□□ 0.44
Pbx1P41778 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.78■□□□□ 0.44
Pbx1P41778 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pbx1P41778 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Pbx1P41778 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.77■□□□□ 0.44
Pbx1P41778 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pbx1P41778 Mir5122-201ENSMUST00000175004 89 ntBASIC17.77■□□□□ 0.44
Pbx1P41778 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.77■□□□□ 0.44
Pbx1P41778 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Prob1-201ENSMUST00000097619 3021 ntBASIC17.77■□□□□ 0.44
Pbx1P41778 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx1P41778 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx1P41778 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Pbx1P41778 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx1P41778 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx1P41778 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx1P41778 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx1P41778 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx1P41778 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx1P41778 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx1P41778 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pbx1P41778 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx1P41778 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.76■□□□□ 0.43
Pbx1P41778 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx1P41778 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms