Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Fen1P39749 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Dio3-201ENSMUST00000097228 1449 ntBASIC16.65■□□□□ 0.26
Fen1P39749 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Fen1P39749 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Fen1P39749 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.65■□□□□ 0.26
Fen1P39749 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.65■□□□□ 0.26
Fen1P39749 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Fen1P39749 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Fen1P39749 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fen1P39749 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Fen1P39749 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Fen1P39749 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.64■□□□□ 0.25
Fen1P39749 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.64■□□□□ 0.25
Fen1P39749 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fen1P39749 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Fen1P39749 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fen1P39749 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Fen1P39749 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Gm11249-201ENSMUST00000117071 859 ntBASIC16.63■□□□□ 0.25
Fen1P39749 Gm12527-201ENSMUST00000117967 564 ntBASIC16.63■□□□□ 0.25
Fen1P39749 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Fen1P39749 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.63■□□□□ 0.25
Fen1P39749 Gm42545-201ENSMUST00000202755 922 ntBASIC16.63■□□□□ 0.25
Fen1P39749 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.63■□□□□ 0.25
Fen1P39749 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Fen1P39749 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Fen1P39749 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Fen1P39749 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fen1P39749 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.62■□□□□ 0.25
Fen1P39749 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Fen1P39749 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.62■□□□□ 0.25
Fen1P39749 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.62■□□□□ 0.25
Fen1P39749 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fen1P39749 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms