Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Col18a1P39061 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Col18a1P39061 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col18a1P39061 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.93■■□□□ 1.1
Col18a1P39061 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC21.92■■□□□ 1.1
Col18a1P39061 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Gm8344-201ENSMUST00000119813 856 ntBASIC21.92■■□□□ 1.1
Col18a1P39061 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 AC126408.1-201ENSMUST00000225184 523 ntBASIC21.92■■□□□ 1.1
Col18a1P39061 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC21.92■■□□□ 1.1
Col18a1P39061 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Col18a1P39061 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Col18a1P39061 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col18a1P39061 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.92■■□□□ 1.1
Col18a1P39061 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col18a1P39061 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col18a1P39061 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Fgf17-202ENSMUST00000227123 1336 ntBASIC21.91■■□□□ 1.1
Col18a1P39061 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Col18a1P39061 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC21.91■■□□□ 1.1
Col18a1P39061 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC21.91■■□□□ 1.1
Col18a1P39061 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC21.91■■□□□ 1.1
Col18a1P39061 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col18a1P39061 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col18a1P39061 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.9■■□□□ 1.1
Col18a1P39061 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC21.9■■□□□ 1.1
Col18a1P39061 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC21.9■■□□□ 1.1
Col18a1P39061 Gm5628-201ENSMUST00000222318 1049 ntBASIC21.9■■□□□ 1.1
Col18a1P39061 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Gm13294-201ENSMUST00000121757 1330 ntBASIC21.9■■□□□ 1.1
Col18a1P39061 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC21.9■■□□□ 1.1
Col18a1P39061 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col18a1P39061 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Col18a1P39061 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col18a1P39061 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC21.89■■□□□ 1.1
Col18a1P39061 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 Gm38318-201ENSMUST00000195769 1706 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Col18a1P39061 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.89■■□□□ 1.09
Col18a1P39061 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm4518-201ENSMUST00000182638 718 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 AC140397.2-201ENSMUST00000224213 834 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.89■■□□□ 1.09
Col18a1P39061 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col18a1P39061 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col18a1P39061 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col18a1P39061 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms