Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.49□□□□□ -0.09
Upk2P38575 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Upk2P38575 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.48□□□□□ -0.09
Upk2P38575 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.48□□□□□ -0.09
Upk2P38575 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.48□□□□□ -0.09
Upk2P38575 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.48□□□□□ -0.09
Upk2P38575 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Upk2P38575 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.48□□□□□ -0.09
Upk2P38575 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk2P38575 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Upk2P38575 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Upk2P38575 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Upk2P38575 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.47□□□□□ -0.09
Upk2P38575 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.47□□□□□ -0.09
Upk2P38575 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk2P38575 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.46□□□□□ -0.09
Upk2P38575 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Gm27389-201ENSMUST00000183622 195 ntBASIC14.46□□□□□ -0.09
Upk2P38575 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.46□□□□□ -0.09
Upk2P38575 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upk2P38575 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.46□□□□□ -0.09
Upk2P38575 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk2P38575 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Upk2P38575 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Upk2P38575 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk2P38575 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk2P38575 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Upk2P38575 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.45□□□□□ -0.1
Upk2P38575 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms