Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfbP31240 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfbP31240 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfbP31240 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfbP31240 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PdgfbP31240 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.47■□□□□ 0.23
PdgfbP31240 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.47■□□□□ 0.23
PdgfbP31240 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.47■□□□□ 0.23
PdgfbP31240 Gm5186-201ENSMUST00000218781 920 ntBASIC16.47■□□□□ 0.23
PdgfbP31240 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PdgfbP31240 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.47■□□□□ 0.23
PdgfbP31240 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfbP31240 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PdgfbP31240 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PdgfbP31240 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PdgfbP31240 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.46■□□□□ 0.23
PdgfbP31240 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.46■□□□□ 0.23
PdgfbP31240 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.46■□□□□ 0.23
PdgfbP31240 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.46■□□□□ 0.23
PdgfbP31240 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfbP31240 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.46■□□□□ 0.22
PdgfbP31240 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PdgfbP31240 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.45■□□□□ 0.22
PdgfbP31240 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PdgfbP31240 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.45■□□□□ 0.22
PdgfbP31240 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.45■□□□□ 0.22
PdgfbP31240 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Gm9172-201ENSMUST00000212092 954 ntBASIC16.45■□□□□ 0.22
PdgfbP31240 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.45■□□□□ 0.22
PdgfbP31240 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.45■□□□□ 0.22
PdgfbP31240 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PdgfbP31240 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfbP31240 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
PdgfbP31240 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.44■□□□□ 0.22
PdgfbP31240 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.44■□□□□ 0.22
PdgfbP31240 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Gm5682-201ENSMUST00000173402 505 ntBASIC16.44■□□□□ 0.22
PdgfbP31240 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.44■□□□□ 0.22
PdgfbP31240 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.44■□□□□ 0.22
PdgfbP31240 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfbP31240 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms