Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm1401-201ENSMUST00000122048 772 ntBASIC18.65■□□□□ 0.58
Col2a1P28481 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col2a1P28481 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.65■□□□□ 0.58
Col2a1P28481 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.65■□□□□ 0.58
Col2a1P28481 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col2a1P28481 Gm6550-201ENSMUST00000187574 993 ntBASIC18.65■□□□□ 0.58
Col2a1P28481 Gm18206-201ENSMUST00000207027 926 ntBASIC18.65■□□□□ 0.58
Col2a1P28481 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col2a1P28481 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.64■□□□□ 0.58
Col2a1P28481 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col2a1P28481 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.64■□□□□ 0.57
Col2a1P28481 AV026068-213ENSMUST00000223675 1171 ntBASIC18.64■□□□□ 0.57
Col2a1P28481 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Col2a1P28481 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col2a1P28481 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col2a1P28481 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col2a1P28481 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Gm27525-201ENSMUST00000184465 107 ntBASIC18.63■□□□□ 0.57
Col2a1P28481 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.63■□□□□ 0.57
Col2a1P28481 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Col2a1P28481 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col2a1P28481 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Gm15173-201ENSMUST00000122049 433 ntBASIC18.62■□□□□ 0.57
Col2a1P28481 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.62■□□□□ 0.57
Col2a1P28481 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.62■□□□□ 0.57
Col2a1P28481 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.62■□□□□ 0.57
Col2a1P28481 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col2a1P28481 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.62■□□□□ 0.57
Col2a1P28481 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.61■□□□□ 0.57
Col2a1P28481 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Col2a1P28481 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col2a1P28481 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col2a1P28481 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Col2a1P28481 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Col2a1P28481 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col2a1P28481 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Col2a1P28481 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.6■□□□□ 0.57
Col2a1P28481 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.6■□□□□ 0.57
Col2a1P28481 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col2a1P28481 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Col2a1P28481 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Col2a1P28481 Gm7222-201ENSMUST00000117512 906 ntBASIC18.59■□□□□ 0.57
Col2a1P28481 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col2a1P28481 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.59■□□□□ 0.57
Col2a1P28481 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col2a1P28481 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.59■□□□□ 0.57
Col2a1P28481 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.59■□□□□ 0.57
Col2a1P28481 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Col2a1P28481 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col2a1P28481 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.59■□□□□ 0.57
Col2a1P28481 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Col2a1P28481 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms