Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pde6aP27664 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6aP27664 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pde6aP27664 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pde6aP27664 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pde6aP27664 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.13■□□□□ 0.65
Pde6aP27664 Gm33142-201ENSMUST00000193913 867 ntBASIC19.13■□□□□ 0.65
Pde6aP27664 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Pde6aP27664 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6aP27664 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pde6aP27664 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pde6aP27664 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.12■□□□□ 0.65
Pde6aP27664 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.12■□□□□ 0.65
Pde6aP27664 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Pde6aP27664 Gm36967-201ENSMUST00000193814 266 ntBASIC19.12■□□□□ 0.65
Pde6aP27664 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.12■□□□□ 0.65
Pde6aP27664 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6aP27664 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pde6aP27664 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.11■□□□□ 0.65
Pde6aP27664 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.11■□□□□ 0.65
Pde6aP27664 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Pde6aP27664 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6aP27664 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.1■□□□□ 0.65
Pde6aP27664 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pde6aP27664 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Gm15794-201ENSMUST00000120182 631 ntBASIC19.1■□□□□ 0.65
Pde6aP27664 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pde6aP27664 Gm45328-201ENSMUST00000210942 917 ntBASIC19.1■□□□□ 0.65
Pde6aP27664 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.1■□□□□ 0.65
Pde6aP27664 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pde6aP27664 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.1■□□□□ 0.65
Pde6aP27664 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pde6aP27664 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6aP27664 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pde6aP27664 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.09■□□□□ 0.65
Pde6aP27664 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pde6aP27664 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6aP27664 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.09■□□□□ 0.65
Pde6aP27664 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms