Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Irf8P23611 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.8■□□□□ 0.44
Irf8P23611 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Irf8P23611 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Gm45328-201ENSMUST00000210942 917 ntBASIC17.79■□□□□ 0.44
Irf8P23611 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.79■□□□□ 0.44
Irf8P23611 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Irf8P23611 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Irf8P23611 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Irf8P23611 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Irf8P23611 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Irf8P23611 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Irf8P23611 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Gm44430-201ENSMUST00000203376 995 ntBASIC17.78■□□□□ 0.44
Irf8P23611 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Irf8P23611 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Irf8P23611 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.77■□□□□ 0.44
Irf8P23611 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Irf8P23611 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Gm10052-201ENSMUST00000168019 960 ntBASIC17.77■□□□□ 0.44
Irf8P23611 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Irf8P23611 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Gm7729-201ENSMUST00000050143 801 ntBASIC17.77■□□□□ 0.44
Irf8P23611 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Irf8P23611 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Irf8P23611 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Irf8P23611 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Irf8P23611 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Irf8P23611 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Irf8P23611 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.76■□□□□ 0.43
Irf8P23611 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.76■□□□□ 0.43
Irf8P23611 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.76■□□□□ 0.43
Irf8P23611 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Irf8P23611 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms