Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.35□□□□□ -0.27
Cdx1P18111 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdx1P18111 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx1P18111 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Cdx1P18111 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.34□□□□□ -0.27
Cdx1P18111 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.34□□□□□ -0.27
Cdx1P18111 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cdx1P18111 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx1P18111 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx1P18111 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx1P18111 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdx1P18111 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cdx1P18111 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cdx1P18111 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx1P18111 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx1P18111 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cdx1P18111 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx1P18111 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx1P18111 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdx1P18111 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Gm11249-201ENSMUST00000117071 859 ntBASIC13.33□□□□□ -0.28
Cdx1P18111 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdx1P18111 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.33□□□□□ -0.28
Cdx1P18111 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdx1P18111 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdx1P18111 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx1P18111 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.32□□□□□ -0.28
Cdx1P18111 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Gm15378-201ENSMUST00000121894 207 ntBASIC13.32□□□□□ -0.28
Cdx1P18111 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdx1P18111 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms