Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccl3P10855 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccl3P10855 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccl3P10855 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Ccl3P10855 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ccl3P10855 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccl3P10855 Gm5264-201ENSMUST00000190584 848 ntBASIC14.56□□□□□ -0.08
Ccl3P10855 Psmb5-202ENSMUST00000227257 622 ntBASIC14.56□□□□□ -0.08
Ccl3P10855 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.56□□□□□ -0.08
Ccl3P10855 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccl3P10855 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccl3P10855 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl3P10855 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.56□□□□□ -0.08
Ccl3P10855 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ccl3P10855 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccl3P10855 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ccl3P10855 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.55□□□□□ -0.08
Ccl3P10855 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.55□□□□□ -0.08
Ccl3P10855 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.55□□□□□ -0.08
Ccl3P10855 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccl3P10855 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccl3P10855 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl3P10855 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl3P10855 Gm12497-201ENSMUST00000138778 237 ntBASIC14.54□□□□□ -0.08
Ccl3P10855 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl3P10855 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccl3P10855 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccl3P10855 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.54□□□□□ -0.08
Ccl3P10855 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.54□□□□□ -0.08
Ccl3P10855 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl3P10855 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccl3P10855 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccl3P10855 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl3P10855 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Gm8097-201ENSMUST00000117903 829 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Gm4459-201ENSMUST00000118750 468 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Gm15467-201ENSMUST00000120582 445 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccl3P10855 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ccl3P10855 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Ccl3P10855 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccl3P10855 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Ccl3P10855 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ccl3P10855 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms