Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.35■■□□□ 1.01
Hoxc9P09633 Gm5264-201ENSMUST00000190584 848 ntBASIC21.35■■□□□ 1.01
Hoxc9P09633 Gm9172-201ENSMUST00000212092 954 ntBASIC21.35■■□□□ 1.01
Hoxc9P09633 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.35■■□□□ 1.01
Hoxc9P09633 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.35■■□□□ 1.01
Hoxc9P09633 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxc9P09633 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Hoxc9P09633 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.34■■□□□ 1.01
Hoxc9P09633 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Hoxc9P09633 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.34■■□□□ 1.01
Hoxc9P09633 Gm8655-201ENSMUST00000221159 852 ntBASIC21.34■■□□□ 1.01
Hoxc9P09633 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.34■■□□□ 1.01
Hoxc9P09633 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.34■■□□□ 1.01
Hoxc9P09633 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.34■■□□□ 1.01
Hoxc9P09633 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxc9P09633 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.33■■□□□ 1.01
Hoxc9P09633 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Hoxc9P09633 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Hoxc9P09633 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Hoxc9P09633 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Hoxc9P09633 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.33■■□□□ 1.01
Hoxc9P09633 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxc9P09633 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
Hoxc9P09633 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.33■■□□□ 1
Hoxc9P09633 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.33■■□□□ 1
Hoxc9P09633 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hoxc9P09633 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Hoxc9P09633 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hoxc9P09633 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.32■■□□□ 1
Hoxc9P09633 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.32■■□□□ 1
Hoxc9P09633 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hoxc9P09633 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.32■■□□□ 1
Hoxc9P09633 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hoxc9P09633 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.32■■□□□ 1
Hoxc9P09633 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hoxc9P09633 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Hoxc9P09633 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hoxc9P09633 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.31■■□□□ 1
Hoxc9P09633 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxc9P09633 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.31■■□□□ 1
Hoxc9P09633 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Hoxc9P09633 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.31■■□□□ 1
Hoxc9P09633 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.3■■□□□ 1
Hoxc9P09633 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Gm13036-201ENSMUST00000117799 748 ntBASIC21.3■■□□□ 1
Hoxc9P09633 Gm15467-201ENSMUST00000120582 445 ntBASIC21.3■■□□□ 1
Hoxc9P09633 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.3■■□□□ 1
Hoxc9P09633 Gm27628-201ENSMUST00000184911 107 ntBASIC21.3■■□□□ 1
Hoxc9P09633 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.3■■□□□ 1
Hoxc9P09633 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Hoxc9P09633 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxc9P09633 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.29■■□□□ 1
Hoxc9P09633 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms