Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.74■□□□□ 0.59
Polr2aP08775 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Polr2aP08775 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Polr2aP08775 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.74■□□□□ 0.59
Polr2aP08775 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Polr2aP08775 Mir6404-201ENSMUST00000183699 94 ntBASIC18.74■□□□□ 0.59
Polr2aP08775 Gm44492-201ENSMUST00000197012 141 ntBASIC18.74■□□□□ 0.59
Polr2aP08775 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.74■□□□□ 0.59
Polr2aP08775 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Polr2aP08775 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2aP08775 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Polr2aP08775 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Gm8825-201ENSMUST00000182565 998 ntBASIC18.73■□□□□ 0.59
Polr2aP08775 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.73■□□□□ 0.59
Polr2aP08775 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.73■□□□□ 0.59
Polr2aP08775 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Polr2aP08775 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr2aP08775 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr2aP08775 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.73■□□□□ 0.59
Polr2aP08775 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr2aP08775 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Polr2aP08775 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2aP08775 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr2aP08775 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Polr2aP08775 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr2aP08775 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Gm43125-201ENSMUST00000201724 730 ntBASIC18.72■□□□□ 0.59
Polr2aP08775 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Polr2aP08775 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Gm13616-201ENSMUST00000120600 222 ntBASIC18.72■□□□□ 0.59
Polr2aP08775 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr2aP08775 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2aP08775 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Gm14057-201ENSMUST00000120631 482 ntBASIC18.71■□□□□ 0.59
Polr2aP08775 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Polr2aP08775 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.71■□□□□ 0.59
Polr2aP08775 Gm20949-201ENSMUST00000206478 952 ntBASIC18.71■□□□□ 0.59
Polr2aP08775 Gm45167-201ENSMUST00000208007 322 ntBASIC18.71■□□□□ 0.59
Polr2aP08775 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr2aP08775 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Polr2aP08775 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Polr2aP08775 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Polr2aP08775 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.7■□□□□ 0.58
Polr2aP08775 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.7■□□□□ 0.58
Polr2aP08775 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.7■□□□□ 0.58
Polr2aP08775 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Polr2aP08775 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms