Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ApoeP08226 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.65■□□□□ 0.1
ApoeP08226 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.65■□□□□ 0.1
ApoeP08226 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.65■□□□□ 0.1
ApoeP08226 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ApoeP08226 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.65■□□□□ 0.1
ApoeP08226 Gm18284-201ENSMUST00000172604 624 ntBASIC15.65■□□□□ 0.1
ApoeP08226 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.65■□□□□ 0.1
ApoeP08226 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ApoeP08226 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ApoeP08226 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ApoeP08226 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
ApoeP08226 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ApoeP08226 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
ApoeP08226 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.63■□□□□ 0.09
ApoeP08226 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gm12933-201ENSMUST00000120203 872 ntBASIC15.63■□□□□ 0.09
ApoeP08226 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gm27405-201ENSMUST00000184201 112 ntBASIC15.63■□□□□ 0.09
ApoeP08226 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.63■□□□□ 0.09
ApoeP08226 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.63■□□□□ 0.09
ApoeP08226 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
ApoeP08226 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.63■□□□□ 0.09
ApoeP08226 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ApoeP08226 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ApoeP08226 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ApoeP08226 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.62■□□□□ 0.09
ApoeP08226 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.62■□□□□ 0.09
ApoeP08226 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.62■□□□□ 0.09
ApoeP08226 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ApoeP08226 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.62■□□□□ 0.09
ApoeP08226 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms