Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.39□□□□□ -0.27
P04940 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P04940 Gm37722-201ENSMUST00000193757 208 ntBASIC13.39□□□□□ -0.27
P04940 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.39□□□□□ -0.27
P04940 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.39□□□□□ -0.27
P04940 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.39□□□□□ -0.27
P04940 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04940 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.38□□□□□ -0.27
P04940 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Gm11355-201ENSMUST00000121120 306 ntBASIC13.38□□□□□ -0.27
P04940 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.38□□□□□ -0.27
P04940 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.38□□□□□ -0.27
P04940 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.38□□□□□ -0.27
P04940 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.38□□□□□ -0.27
P04940 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P04940 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.38□□□□□ -0.27
P04940 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.38□□□□□ -0.27
P04940 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04940 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.38□□□□□ -0.27
P04940 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.38□□□□□ -0.27
P04940 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.37□□□□□ -0.27
P04940 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.37□□□□□ -0.27
P04940 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
P04940 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Gm9987-201ENSMUST00000069768 567 ntBASIC13.37□□□□□ -0.27
P04940 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.37□□□□□ -0.27
P04940 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.37□□□□□ -0.27
P04940 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
P04940 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04940 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
P04940 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.36□□□□□ -0.27
P04940 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Gm10013-201ENSMUST00000106074 672 ntBASIC13.36□□□□□ -0.27
P04940 Gm10231-201ENSMUST00000181584 441 ntBASIC13.36□□□□□ -0.27
P04940 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
P04940 Gm10175-202ENSMUST00000208752 441 ntBASIC13.36□□□□□ -0.27
P04940 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.36□□□□□ -0.27
P04940 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.36□□□□□ -0.27
P04940 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
P04940 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.36□□□□□ -0.27
P04940 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms