Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt1P04104 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Krt1P04104 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt1P04104 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Prob1-201ENSMUST00000097619 3021 ntBASIC15.67■□□□□ 0.1
Krt1P04104 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.67■□□□□ 0.1
Krt1P04104 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.67■□□□□ 0.1
Krt1P04104 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Krt1P04104 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.67■□□□□ 0.1
Krt1P04104 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Krt1P04104 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt1P04104 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.66■□□□□ 0.1
Krt1P04104 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Krt1P04104 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Krt1P04104 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt1P04104 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.66■□□□□ 0.1
Krt1P04104 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.66■□□□□ 0.1
Krt1P04104 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.66■□□□□ 0.1
Krt1P04104 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.66■□□□□ 0.1
Krt1P04104 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.66■□□□□ 0.1
Krt1P04104 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.66■□□□□ 0.1
Krt1P04104 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt1P04104 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt1P04104 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Krt1P04104 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.65■□□□□ 0.1
Krt1P04104 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Krt1P04104 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.65■□□□□ 0.1
Krt1P04104 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.65■□□□□ 0.1
Krt1P04104 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Krt1P04104 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.65■□□□□ 0.1
Krt1P04104 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.65■□□□□ 0.1
Krt1P04104 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt1P04104 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Krt1P04104 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Krt1P04104 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.64■□□□□ 0.09
Krt1P04104 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Krt1P04104 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms