Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.23■□□□□ 0.83
Col4a1P02463 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.22■□□□□ 0.83
Col4a1P02463 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.22■□□□□ 0.83
Col4a1P02463 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col4a1P02463 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Col4a1P02463 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.22■□□□□ 0.83
Col4a1P02463 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.22■□□□□ 0.83
Col4a1P02463 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.22■□□□□ 0.83
Col4a1P02463 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a1P02463 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Col4a1P02463 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.21■□□□□ 0.83
Col4a1P02463 Gm15467-201ENSMUST00000120582 445 ntBASIC20.21■□□□□ 0.83
Col4a1P02463 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a1P02463 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.21■□□□□ 0.83
Col4a1P02463 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col4a1P02463 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col4a1P02463 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.2■□□□□ 0.82
Col4a1P02463 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.2■□□□□ 0.82
Col4a1P02463 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.2■□□□□ 0.82
Col4a1P02463 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.2■□□□□ 0.82
Col4a1P02463 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a1P02463 Gm23935-201ENSMUST00000102303 57 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Gm24270-201ENSMUST00000102326 57 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Gm24245-201ENSMUST00000157318 57 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.19■□□□□ 0.82
Col4a1P02463 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a1P02463 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.19■□□□□ 0.82
Col4a1P02463 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a1P02463 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a1P02463 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Gm43575-201ENSMUST00000196420 516 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Gm9172-201ENSMUST00000212092 954 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.19■□□□□ 0.82
Col4a1P02463 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a1P02463 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.18■□□□□ 0.82
Col4a1P02463 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.18■□□□□ 0.82
Col4a1P02463 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col4a1P02463 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.18■□□□□ 0.82
Col4a1P02463 Gm9727-201ENSMUST00000161387 555 ntBASIC20.18■□□□□ 0.82
Col4a1P02463 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.18■□□□□ 0.82
Col4a1P02463 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.18■□□□□ 0.82
Col4a1P02463 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.18■□□□□ 0.82
Col4a1P02463 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col4a1P02463 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Col4a1P02463 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a1P02463 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms