Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Hbb-b1P02088 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hbb-b1P02088 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm15820-201ENSMUST00000201566 728 ntBASIC11.69□□□□□ -0.54
Hbb-b1P02088 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.69□□□□□ -0.54
Hbb-b1P02088 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hbb-b1P02088 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.68□□□□□ -0.54
Hbb-b1P02088 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hbb-b1P02088 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hbb-b1P02088 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms