Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
TcraP01849 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.1□□□□□ -0.47
TcraP01849 Gm42569-201ENSMUST00000200539 472 ntBASIC12.1□□□□□ -0.47
TcraP01849 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.1□□□□□ -0.47
TcraP01849 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TcraP01849 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.1□□□□□ -0.47
TcraP01849 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TcraP01849 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
TcraP01849 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TcraP01849 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
TcraP01849 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TcraP01849 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TcraP01849 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TcraP01849 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TcraP01849 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
TcraP01849 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TcraP01849 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TcraP01849 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Gm10418-201ENSMUST00000100943 576 ntBASIC12.08□□□□□ -0.48
TcraP01849 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TcraP01849 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.08□□□□□ -0.48
TcraP01849 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.08□□□□□ -0.48
TcraP01849 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TcraP01849 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.08□□□□□ -0.48
TcraP01849 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TcraP01849 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.07□□□□□ -0.48
TcraP01849 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.07□□□□□ -0.48
TcraP01849 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TcraP01849 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TcraP01849 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.07□□□□□ -0.48
TcraP01849 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms