Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.69□□□□□ -0.54
Sh2d1aO88890 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2d1aO88890 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.68□□□□□ -0.54
Sh2d1aO88890 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gm7791-201ENSMUST00000219066 539 ntBASIC11.68□□□□□ -0.54
Sh2d1aO88890 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.68□□□□□ -0.54
Sh2d1aO88890 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sh2d1aO88890 Dancr-204ENSMUST00000132389 2347 ntBASIC11.68□□□□□ -0.54
Sh2d1aO88890 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms