Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn1O88704 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.83■□□□□ 0.12
Hcn1O88704 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Hcn1O88704 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn1O88704 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn1O88704 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hcn1O88704 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hcn1O88704 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Gm18959-201ENSMUST00000208954 655 ntBASIC15.82■□□□□ 0.12
Hcn1O88704 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Hcn1O88704 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.82■□□□□ 0.12
Hcn1O88704 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.82■□□□□ 0.12
Hcn1O88704 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.82■□□□□ 0.12
Hcn1O88704 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn1O88704 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hcn1O88704 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hcn1O88704 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hcn1O88704 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Hcn1O88704 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Hcn1O88704 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn1O88704 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.8■□□□□ 0.12
Hcn1O88704 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.8■□□□□ 0.12
Hcn1O88704 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hcn1O88704 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hcn1O88704 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.8■□□□□ 0.12
Hcn1O88704 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.8■□□□□ 0.12
Hcn1O88704 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.8■□□□□ 0.12
Hcn1O88704 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.8■□□□□ 0.12
Hcn1O88704 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn1O88704 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hcn1O88704 Gm45058-201ENSMUST00000205810 766 ntBASIC15.79■□□□□ 0.12
Hcn1O88704 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hcn1O88704 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hcn1O88704 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hcn1O88704 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hcn1O88704 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms