Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cldn1O88551 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Mir5131-201ENSMUST00000175426 93 ntBASIC14.12□□□□□ -0.15
Cldn1O88551 Gm8000-201ENSMUST00000188378 592 ntBASIC14.12□□□□□ -0.15
Cldn1O88551 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cldn1O88551 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cldn1O88551 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Cldn1O88551 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cldn1O88551 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn1O88551 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cldn1O88551 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldn1O88551 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.11□□□□□ -0.15
Cldn1O88551 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.11□□□□□ -0.15
Cldn1O88551 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.11□□□□□ -0.15
Cldn1O88551 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cldn1O88551 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldn1O88551 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn1O88551 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.11□□□□□ -0.15
Cldn1O88551 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn1O88551 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cldn1O88551 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cldn1O88551 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn1O88551 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn1O88551 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldn1O88551 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldn1O88551 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldn1O88551 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Gm6376-201ENSMUST00000209407 580 ntBASIC14.1□□□□□ -0.15
Cldn1O88551 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.1□□□□□ -0.15
Cldn1O88551 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.1□□□□□ -0.15
Cldn1O88551 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cldn1O88551 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cldn1O88551 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.1□□□□□ -0.15
Cldn1O88551 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn1O88551 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn1O88551 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.09□□□□□ -0.15
Cldn1O88551 Gm7862-201ENSMUST00000121461 292 ntBASIC14.09□□□□□ -0.15
Cldn1O88551 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.09□□□□□ -0.15
Cldn1O88551 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms