Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.8□□□□□ -0.04
Cops3O88543 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cops3O88543 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.8□□□□□ -0.04
Cops3O88543 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cops3O88543 Gm15378-201ENSMUST00000121894 207 ntBASIC14.8□□□□□ -0.04
Cops3O88543 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.8□□□□□ -0.04
Cops3O88543 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Cops3O88543 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cops3O88543 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops3O88543 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cops3O88543 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cops3O88543 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cops3O88543 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Gm7638-201ENSMUST00000121348 967 ntBASIC14.79□□□□□ -0.04
Cops3O88543 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.79□□□□□ -0.04
Cops3O88543 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.79□□□□□ -0.04
Cops3O88543 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.79□□□□□ -0.04
Cops3O88543 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cops3O88543 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cops3O88543 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cops3O88543 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cops3O88543 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops3O88543 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops3O88543 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops3O88543 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops3O88543 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.78□□□□□ -0.04
Cops3O88543 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops3O88543 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops3O88543 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cops3O88543 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.78□□□□□ -0.04
Cops3O88543 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops3O88543 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.78□□□□□ -0.04
Cops3O88543 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cops3O88543 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.77□□□□□ -0.04
Cops3O88543 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops3O88543 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.77□□□□□ -0.05
Cops3O88543 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cops3O88543 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms