Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.18■□□□□ 0.5
Stra6O70491 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.18■□□□□ 0.5
Stra6O70491 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.18■□□□□ 0.5
Stra6O70491 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.18■□□□□ 0.5
Stra6O70491 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Stra6O70491 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra6O70491 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Stra6O70491 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.17■□□□□ 0.5
Stra6O70491 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.17■□□□□ 0.5
Stra6O70491 Gm7506-201ENSMUST00000207758 815 ntBASIC18.17■□□□□ 0.5
Stra6O70491 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.17■□□□□ 0.5
Stra6O70491 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.17■□□□□ 0.5
Stra6O70491 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra6O70491 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Stra6O70491 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Stra6O70491 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Stra6O70491 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Stra6O70491 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.16■□□□□ 0.5
Stra6O70491 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Stra6O70491 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra6O70491 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Stra6O70491 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Gm27525-201ENSMUST00000184465 107 ntBASIC18.15■□□□□ 0.5
Stra6O70491 Gm2651-201ENSMUST00000203560 838 ntBASIC18.15■□□□□ 0.5
Stra6O70491 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Stra6O70491 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Stra6O70491 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Stra6O70491 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.15■□□□□ 0.5
Stra6O70491 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Stra6O70491 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Stra6O70491 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra6O70491 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.14■□□□□ 0.49
Stra6O70491 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Stra6O70491 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra6O70491 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.14■□□□□ 0.49
Stra6O70491 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms