Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ubr1O70481 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ubr1O70481 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubr1O70481 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubr1O70481 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubr1O70481 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ubr1O70481 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubr1O70481 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Ubr1O70481 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.32■■□□□ 1
Ubr1O70481 Gm8655-201ENSMUST00000221159 852 ntBASIC21.32■■□□□ 1
Ubr1O70481 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Ubr1O70481 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ubr1O70481 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubr1O70481 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ubr1O70481 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ubr1O70481 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.31■■□□□ 1
Ubr1O70481 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.31■■□□□ 1
Ubr1O70481 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ubr1O70481 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ubr1O70481 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ubr1O70481 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.31■■□□□ 1
Ubr1O70481 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.31■■□□□ 1
Ubr1O70481 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubr1O70481 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ubr1O70481 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.3■■□□□ 1
Ubr1O70481 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Ubr1O70481 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Gm13216-201ENSMUST00000117145 591 ntBASIC21.3■■□□□ 1
Ubr1O70481 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ubr1O70481 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ubr1O70481 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.3■■□□□ 1
Ubr1O70481 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr1O70481 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Ubr1O70481 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.29■■□□□ 1
Ubr1O70481 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ubr1O70481 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Ubr1O70481 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.29■■□□□ 1
Ubr1O70481 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.29■■□□□ 1
Ubr1O70481 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubr1O70481 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ubr1O70481 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ubr1O70481 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.28■■□□□ 1
Ubr1O70481 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr1O70481 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ubr1O70481 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.27■■□□□ 1
Ubr1O70481 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.27■■□□□ 1
Ubr1O70481 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms