Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Mir1668-201ENSMUST00000184114 107 ntBASIC15.63■□□□□ 0.09
Rdh5O55240 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.63■□□□□ 0.09
Rdh5O55240 Gm18115-201ENSMUST00000221209 621 ntBASIC15.63■□□□□ 0.09
Rdh5O55240 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.63■□□□□ 0.09
Rdh5O55240 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.63■□□□□ 0.09
Rdh5O55240 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.62■□□□□ 0.09
Rdh5O55240 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rdh5O55240 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rdh5O55240 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.62■□□□□ 0.09
Rdh5O55240 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rdh5O55240 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rdh5O55240 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh5O55240 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Rdh5O55240 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh5O55240 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh5O55240 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rdh5O55240 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.61■□□□□ 0.09
Rdh5O55240 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh5O55240 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rdh5O55240 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rdh5O55240 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rdh5O55240 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh5O55240 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rdh5O55240 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh5O55240 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.6■□□□□ 0.09
Rdh5O55240 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rdh5O55240 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rdh5O55240 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Gm10013-201ENSMUST00000106074 672 ntBASIC15.6■□□□□ 0.09
Rdh5O55240 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rdh5O55240 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.6■□□□□ 0.09
Rdh5O55240 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rdh5O55240 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.6■□□□□ 0.09
Rdh5O55240 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh5O55240 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms