Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.13■□□□□ 0.49
Trdmt1O55055 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.13■□□□□ 0.49
Trdmt1O55055 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trdmt1O55055 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Gm8097-201ENSMUST00000117903 829 ntBASIC18.12■□□□□ 0.49
Trdmt1O55055 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.12■□□□□ 0.49
Trdmt1O55055 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Gm6089-201ENSMUST00000197666 938 ntBASIC18.12■□□□□ 0.49
Trdmt1O55055 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Gm15590-201ENSMUST00000078419 552 ntBASIC18.12■□□□□ 0.49
Trdmt1O55055 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.12■□□□□ 0.49
Trdmt1O55055 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdmt1O55055 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Gm11780-201ENSMUST00000136880 516 ntBASIC18.11■□□□□ 0.49
Trdmt1O55055 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.11■□□□□ 0.49
Trdmt1O55055 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Gm5264-201ENSMUST00000190584 848 ntBASIC18.11■□□□□ 0.49
Trdmt1O55055 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.11■□□□□ 0.49
Trdmt1O55055 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.11■□□□□ 0.49
Trdmt1O55055 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.11■□□□□ 0.49
Trdmt1O55055 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trdmt1O55055 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.1■□□□□ 0.49
Trdmt1O55055 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.1■□□□□ 0.49
Trdmt1O55055 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.1■□□□□ 0.49
Trdmt1O55055 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trdmt1O55055 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdmt1O55055 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Gm9172-201ENSMUST00000212092 954 ntBASIC18.09■□□□□ 0.49
Trdmt1O55055 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Gm8655-201ENSMUST00000221159 852 ntBASIC18.09■□□□□ 0.49
Trdmt1O55055 AV026068-213ENSMUST00000223675 1171 ntBASIC18.09■□□□□ 0.49
Trdmt1O55055 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdmt1O55055 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms