Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Kcnu1O54982 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Kcnu1O54982 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Kcnu1O54982 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Kcnu1O54982 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Kcnu1O54982 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Kcnu1O54982 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Kcnu1O54982 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.58■□□□□ 0.4
Kcnu1O54982 Gm43799-201ENSMUST00000201845 579 ntBASIC17.58■□□□□ 0.4
Kcnu1O54982 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Kcnu1O54982 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Kcnu1O54982 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Kcnu1O54982 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Kcnu1O54982 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.58■□□□□ 0.4
Kcnu1O54982 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Kcnu1O54982 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Kcnu1O54982 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Gm13474-201ENSMUST00000122466 815 ntBASIC17.57■□□□□ 0.4
Kcnu1O54982 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.57■□□□□ 0.4
Kcnu1O54982 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Kcnu1O54982 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Kcnu1O54982 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Kcnu1O54982 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Gm15565-201ENSMUST00000118890 427 ntBASIC17.55■□□□□ 0.4
Kcnu1O54982 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Gm18421-201ENSMUST00000204122 625 ntBASIC17.55■□□□□ 0.4
Kcnu1O54982 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.55■□□□□ 0.4
Kcnu1O54982 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Kcnu1O54982 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Kcnu1O54982 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Kcnu1O54982 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.54■□□□□ 0.4
Kcnu1O54982 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Kcnu1O54982 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.54■□□□□ 0.4
Kcnu1O54982 Gm10252-201ENSMUST00000209541 832 ntBASIC17.54■□□□□ 0.4
Kcnu1O54982 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.54■□□□□ 0.4
Kcnu1O54982 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Kcnu1O54982 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms