Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
DffbO54788 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
DffbO54788 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DffbO54788 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.19□□□□□ -0.14
DffbO54788 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.19□□□□□ -0.14
DffbO54788 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.19□□□□□ -0.14
DffbO54788 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DffbO54788 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DffbO54788 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.18□□□□□ -0.14
DffbO54788 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
DffbO54788 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DffbO54788 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
DffbO54788 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.18□□□□□ -0.14
DffbO54788 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.18□□□□□ -0.14
DffbO54788 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Gm27011-201ENSMUST00000182352 972 ntBASIC14.18□□□□□ -0.14
DffbO54788 Gm10698-201ENSMUST00000182663 604 ntBASIC14.18□□□□□ -0.14
DffbO54788 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.18□□□□□ -0.14
DffbO54788 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.18□□□□□ -0.14
DffbO54788 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DffbO54788 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffbO54788 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DffbO54788 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DffbO54788 Gm5643-201ENSMUST00000117081 966 ntBASIC14.17□□□□□ -0.14
DffbO54788 Gm12085-201ENSMUST00000119263 940 ntBASIC14.17□□□□□ -0.14
DffbO54788 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.17□□□□□ -0.14
DffbO54788 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.17□□□□□ -0.14
DffbO54788 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.17□□□□□ -0.14
DffbO54788 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.17□□□□□ -0.14
DffbO54788 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffbO54788 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
DffbO54788 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.16□□□□□ -0.14
DffbO54788 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
DffbO54788 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DffbO54788 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms