Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DffaO54786 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DffaO54786 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Mir5130-201ENSMUST00000175160 84 ntBASIC17.29■□□□□ 0.36
DffaO54786 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
DffaO54786 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DffaO54786 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
DffaO54786 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DffaO54786 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.28■□□□□ 0.36
DffaO54786 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.28■□□□□ 0.36
DffaO54786 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DffaO54786 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DffaO54786 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffaO54786 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.27■□□□□ 0.36
DffaO54786 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.27■□□□□ 0.36
DffaO54786 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DffaO54786 Actl10-202ENSMUST00000226583 1501 ntBASIC17.27■□□□□ 0.36
DffaO54786 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DffaO54786 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
DffaO54786 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DffaO54786 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.27■□□□□ 0.36
DffaO54786 Gm18959-201ENSMUST00000208954 655 ntBASIC17.27■□□□□ 0.36
DffaO54786 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffaO54786 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
DffaO54786 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffaO54786 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.27■□□□□ 0.35
DffaO54786 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DffaO54786 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DffaO54786 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
DffaO54786 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffaO54786 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffaO54786 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.26■□□□□ 0.35
DffaO54786 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DffaO54786 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.26■□□□□ 0.35
DffaO54786 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
DffaO54786 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffaO54786 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.26■□□□□ 0.35
DffaO54786 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DffaO54786 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DffaO54786 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DffaO54786 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffaO54786 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms