Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.45■□□□□ 0.06
Abca4O35600 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.45■□□□□ 0.06
Abca4O35600 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.45■□□□□ 0.06
Abca4O35600 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.45■□□□□ 0.06
Abca4O35600 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Abca4O35600 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Abca4O35600 Gm43630-201ENSMUST00000201550 776 ntBASIC15.44■□□□□ 0.06
Abca4O35600 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Abca4O35600 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.44■□□□□ 0.06
Abca4O35600 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Grk6-207ENSMUST00000225925 2769 ntBASIC15.44■□□□□ 0.06
Abca4O35600 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Abca4O35600 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Abca4O35600 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Rprl2-201ENSMUST00000157150 290 ntBASIC15.44■□□□□ 0.06
Abca4O35600 Gm25406-201ENSMUST00000157599 105 ntBASIC15.44■□□□□ 0.06
Abca4O35600 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Mir6420-201ENSMUST00000185032 102 ntBASIC15.44■□□□□ 0.06
Abca4O35600 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Abca4O35600 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.44■□□□□ 0.06
Abca4O35600 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca4O35600 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.43■□□□□ 0.06
Abca4O35600 Gm13223-201ENSMUST00000118609 747 ntBASIC15.43■□□□□ 0.06
Abca4O35600 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Gm6007-201ENSMUST00000208170 823 ntBASIC15.43■□□□□ 0.06
Abca4O35600 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Abca4O35600 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.43■□□□□ 0.06
Abca4O35600 Gm27430-201ENSMUST00000184585 107 ntBASIC15.43■□□□□ 0.06
Abca4O35600 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Gm44333-201ENSMUST00000197168 107 ntBASIC15.43■□□□□ 0.06
Abca4O35600 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca4O35600 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Abca4O35600 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Abca4O35600 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Abca4O35600 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Gm5177-201ENSMUST00000183092 997 ntBASIC15.42■□□□□ 0.06
Abca4O35600 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Gm45167-201ENSMUST00000208007 322 ntBASIC15.42■□□□□ 0.06
Abca4O35600 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.42■□□□□ 0.06
Abca4O35600 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca4O35600 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Abca4O35600 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.41■□□□□ 0.06
Abca4O35600 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Abca4O35600 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Abca4O35600 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.41■□□□□ 0.06
Abca4O35600 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Abca4O35600 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca4O35600 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms