Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.72■□□□□ 0.11
Clk3O35492 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.72■□□□□ 0.11
Clk3O35492 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Clk3O35492 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clk3O35492 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.72■□□□□ 0.11
Clk3O35492 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clk3O35492 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.71■□□□□ 0.11
Clk3O35492 Gm37055-201ENSMUST00000191866 133 ntBASIC15.71■□□□□ 0.11
Clk3O35492 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.71■□□□□ 0.11
Clk3O35492 Gm3375-201ENSMUST00000203929 796 ntBASIC15.71■□□□□ 0.11
Clk3O35492 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Gm9731-201ENSMUST00000209480 747 ntBASIC15.71■□□□□ 0.11
Clk3O35492 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.71■□□□□ 0.11
Clk3O35492 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.71■□□□□ 0.11
Clk3O35492 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clk3O35492 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Clk3O35492 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk3O35492 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clk3O35492 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.71■□□□□ 0.1
Clk3O35492 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Gm7638-201ENSMUST00000121348 967 ntBASIC15.7■□□□□ 0.1
Clk3O35492 Gm17661-201ENSMUST00000170317 270 ntBASIC15.7■□□□□ 0.1
Clk3O35492 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Clk3O35492 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clk3O35492 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Clk3O35492 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.7■□□□□ 0.1
Clk3O35492 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Clk3O35492 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk3O35492 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.69■□□□□ 0.1
Clk3O35492 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk3O35492 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.69■□□□□ 0.1
Clk3O35492 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Clk3O35492 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk3O35492 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clk3O35492 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms