Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm37234-201ENSMUST00000193259 1441 ntBASIC17.68■□□□□ 0.42
Clcn6O35454 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Clcn6O35454 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.68■□□□□ 0.42
Clcn6O35454 Gm9520-201ENSMUST00000209460 1253 ntBASIC17.68■□□□□ 0.42
Clcn6O35454 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC17.68■□□□□ 0.42
Clcn6O35454 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.68■□□□□ 0.42
Clcn6O35454 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC17.68■□□□□ 0.42
Clcn6O35454 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.68■□□□□ 0.42
Clcn6O35454 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Clcn6O35454 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn6O35454 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn6O35454 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Clcn6O35454 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn6O35454 Gm5133-201ENSMUST00000118940 1255 ntBASIC17.67■□□□□ 0.42
Clcn6O35454 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.67■□□□□ 0.42
Clcn6O35454 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC17.67■□□□□ 0.42
Clcn6O35454 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Gm44286-201ENSMUST00000204098 1487 ntBASIC17.67■□□□□ 0.42
Clcn6O35454 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.67■□□□□ 0.42
Clcn6O35454 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn6O35454 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn6O35454 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clcn6O35454 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn6O35454 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.66■□□□□ 0.42
Clcn6O35454 Gm37576-201ENSMUST00000194228 372 ntBASIC17.66■□□□□ 0.42
Clcn6O35454 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.66■□□□□ 0.42
Clcn6O35454 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC17.66■□□□□ 0.42
Clcn6O35454 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Clcn6O35454 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn6O35454 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clcn6O35454 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Gm34701-201ENSMUST00000204213 849 ntBASIC17.65■□□□□ 0.42
Clcn6O35454 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.65■□□□□ 0.42
Clcn6O35454 Gm35638-201ENSMUST00000220724 652 ntBASIC17.65■□□□□ 0.42
Clcn6O35454 CT009713.1-201ENSMUST00000224828 853 ntBASIC17.65■□□□□ 0.42
Clcn6O35454 AC125539.1-201ENSMUST00000227423 622 ntBASIC17.65■□□□□ 0.42
Clcn6O35454 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clcn6O35454 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn6O35454 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn6O35454 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Clcn6O35454 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms