Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Gfra3O35118 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.27□□□□□ -0.12
Gfra3O35118 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gfra3O35118 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra3O35118 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.27□□□□□ -0.13
Gfra3O35118 Gm27742-201ENSMUST00000184667 60 ntBASIC14.27□□□□□ -0.13
Gfra3O35118 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.27□□□□□ -0.13
Gfra3O35118 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra3O35118 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.27□□□□□ -0.13
Gfra3O35118 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra3O35118 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra3O35118 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.26□□□□□ -0.13
Gfra3O35118 Gm9103-201ENSMUST00000119371 405 ntBASIC14.26□□□□□ -0.13
Gfra3O35118 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.26□□□□□ -0.13
Gfra3O35118 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.26□□□□□ -0.13
Gfra3O35118 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.26□□□□□ -0.13
Gfra3O35118 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Gfra3O35118 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra3O35118 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Gfra3O35118 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gfra3O35118 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.25□□□□□ -0.13
Gfra3O35118 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.25□□□□□ -0.13
Gfra3O35118 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Gm17807-201ENSMUST00000186869 298 ntBASIC14.25□□□□□ -0.13
Gfra3O35118 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.25□□□□□ -0.13
Gfra3O35118 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.25□□□□□ -0.13
Gfra3O35118 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gfra3O35118 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra3O35118 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gfra3O35118 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.24□□□□□ -0.13
Gfra3O35118 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.24□□□□□ -0.13
Gfra3O35118 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.24□□□□□ -0.13
Gfra3O35118 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gfra3O35118 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Gfra3O35118 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra3O35118 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gfra3O35118 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gfra3O35118 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gfra3O35118 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms