Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.65■□□□□ 0.74
Hdac1O09106 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.65■□□□□ 0.74
Hdac1O09106 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hdac1O09106 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac1O09106 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac1O09106 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.65■□□□□ 0.74
Hdac1O09106 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 Phf7-203ENSMUST00000226565 1971 ntBASIC19.64■□□□□ 0.74
Hdac1O09106 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.64■□□□□ 0.74
Hdac1O09106 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac1O09106 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.64■□□□□ 0.73
Hdac1O09106 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hdac1O09106 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hdac1O09106 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac1O09106 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Hdac1O09106 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.63■□□□□ 0.73
Hdac1O09106 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Hdac1O09106 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Odf3b-204ENSMUST00000227834 930 ntBASIC19.63■□□□□ 0.73
Hdac1O09106 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac1O09106 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hdac1O09106 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Prob1-201ENSMUST00000097619 3021 ntBASIC19.62■□□□□ 0.73
Hdac1O09106 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hdac1O09106 Gm3375-201ENSMUST00000203929 796 ntBASIC19.62■□□□□ 0.73
Hdac1O09106 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Hdac1O09106 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.62■□□□□ 0.73
Hdac1O09106 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac1O09106 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hdac1O09106 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.61■□□□□ 0.73
Hdac1O09106 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.61■□□□□ 0.73
Hdac1O09106 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.61■□□□□ 0.73
Hdac1O09106 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hdac1O09106 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hdac1O09106 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.61■□□□□ 0.73
Hdac1O09106 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hdac1O09106 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac1O09106 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hdac1O09106 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hdac1O09106 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms