Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC10.39□□□□□ -0.75
Pkd1O08852 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC10.39□□□□□ -0.75
Pkd1O08852 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC10.39□□□□□ -0.75
Pkd1O08852 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.38□□□□□ -0.75
Pkd1O08852 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pkd1O08852 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Gm15743-202ENSMUST00000182690 1901 ntBASIC10.38□□□□□ -0.75
Pkd1O08852 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pkd1O08852 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Gm37194-201ENSMUST00000193092 3031 ntBASIC10.38□□□□□ -0.75
Pkd1O08852 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Zcchc6-207ENSMUST00000225576 2499 ntBASIC10.38□□□□□ -0.75
Pkd1O08852 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC10.38□□□□□ -0.75
Pkd1O08852 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pkd1O08852 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.37□□□□□ -0.75
Pkd1O08852 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
Pkd1O08852 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.37□□□□□ -0.75
Pkd1O08852 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Pkd1O08852 Mir6977-201ENSMUST00000184960 64 ntBASIC10.37□□□□□ -0.75
Pkd1O08852 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Gm14127-201ENSMUST00000117906 678 ntBASIC10.37□□□□□ -0.75
Pkd1O08852 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1O08852 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1O08852 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pkd1O08852 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.36□□□□□ -0.75
Pkd1O08852 Gm43808-201ENSMUST00000202534 2065 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1O08852 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.36□□□□□ -0.75
Pkd1O08852 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.36□□□□□ -0.75
Pkd1O08852 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.36□□□□□ -0.75
Pkd1O08852 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms