Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ClockO08785 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ClockO08785 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ClockO08785 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ClockO08785 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ClockO08785 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClockO08785 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ClockO08785 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.71■□□□□ 0.11
ClockO08785 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ClockO08785 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ClockO08785 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.71■□□□□ 0.11
ClockO08785 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.71■□□□□ 0.11
ClockO08785 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.71■□□□□ 0.11
ClockO08785 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClockO08785 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClockO08785 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ClockO08785 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.7■□□□□ 0.1
ClockO08785 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ClockO08785 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.7■□□□□ 0.1
ClockO08785 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ClockO08785 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClockO08785 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClockO08785 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.69■□□□□ 0.1
ClockO08785 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.69■□□□□ 0.1
ClockO08785 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ClockO08785 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.69■□□□□ 0.1
ClockO08785 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Gm13148-201ENSMUST00000118892 745 ntBASIC15.69■□□□□ 0.1
ClockO08785 Gm15375-201ENSMUST00000119510 849 ntBASIC15.69■□□□□ 0.1
ClockO08785 Gm12933-201ENSMUST00000120203 872 ntBASIC15.69■□□□□ 0.1
ClockO08785 Gm26524-201ENSMUST00000192339 390 ntBASIC15.69■□□□□ 0.1
ClockO08785 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ClockO08785 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.69■□□□□ 0.1
ClockO08785 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.69■□□□□ 0.1
ClockO08785 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ClockO08785 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClockO08785 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms