Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Gm18195-201ENSMUST00000207604 706 ntBASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.15■□□□□ 0.82
Trim34bJ3QNR8 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.14■□□□□ 0.82
Trim34bJ3QNR8 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.14■□□□□ 0.82
Trim34bJ3QNR8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim34bJ3QNR8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34bJ3QNR8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34bJ3QNR8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim34bJ3QNR8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Gm6376-201ENSMUST00000209407 580 ntBASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim34bJ3QNR8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms